This directory contains reciprocal-best netted chains for dm3-droSim2.
- dm3.droSim2.rbest.net.gz: dm3-referenced recip.best net to droSim2.
- dm3.droSim2.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from dm3 to droSim2 through the recip.best net.
- droSim2.dm3.rbest.net.gz: droSim2-referenced recip.best net.
- droSim2.dm3.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.dm3.droSim2.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2016-11-02 10:23 -
md5sum.txt 2016-11-02 10:11 240
dm3.droSim2.rbest.net.gz 2016-11-02 10:11 4.4M
dm3.droSim2.rbest.chain.gz 2016-11-02 10:11 2.5M
droSim2.dm3.rbest.chain.gz 2016-11-02 10:11 2.5M
droSim2.dm3.rbest.net.gz 2016-11-02 10:11 3.7M