This directory contains reciprocal-best netted chains for danRer10-rn6.

 - danRer10.rn6.rbest.net.gz: danRer10-referenced recip.best net to rn6.
 - danRer10.rn6.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from danRer10 to rn6 through the recip.best net.

 - rn6.danRer10.rbest.net.gz: rn6-referenced recip.best net.
 - rn6.danRer10.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/danRer10.rn6.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2015-09-24 12:34    -   
      md5sum.txt                  2015-09-24 12:27  244   
      danRer10.rn6.rbest.net.gz   2015-09-24 12:27  9.1M  
      danRer10.rn6.rbest.chain.gz 2015-09-24 12:27  5.6M  
      rn6.danRer10.rbest.chain.gz 2015-09-24 12:27  5.6M  
      rn6.danRer10.rbest.net.gz   2015-09-24 12:27  9.4M