This directory contains reciprocal-best netted chains for chlSab2-hg38.
- chlSab2.hg38.rbest.net.gz: chlSab2-referenced recip.best net to hg38.
- chlSab2.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from chlSab2 to hg38 through the recip.best net.
- hg38.chlSab2.rbest.net.gz: hg38-referenced recip.best net.
- hg38.chlSab2.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/chlSab2.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2016-09-27 13:57 -
chlSab2.hg38.rbest.chain.gz 2016-09-27 08:26 34M
chlSab2.hg38.rbest.net.gz 2016-09-27 08:27 54M
hg38.chlSab2.rbest.chain.gz 2016-09-27 08:26 34M
hg38.chlSab2.rbest.net.gz 2016-09-27 08:25 58M
md5sum.txt 2016-09-27 08:27 244