This directory contains reciprocal-best netted chains for canFam3-hg38. - canFam3.hg38.rbest.net.gz: canFam3-referenced recip.best net to hg38. - canFam3.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from canFam3 to hg38 through the recip.best net. - hg38.canFam3.rbest.net.gz: hg38-referenced recip.best net. - hg38.canFam3.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/canFam3.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2015-04-13 22:35 - canFam3.hg38.rbest.chain.gz 2015-04-13 21:57 82M canFam3.hg38.rbest.net.gz 2015-04-13 21:59 135M hg38.canFam3.rbest.chain.gz 2015-04-13 21:56 82M hg38.canFam3.rbest.net.gz 2015-04-13 21:55 150M md5sum.txt 2015-04-13 21:59 244