This directory contains reciprocal-best netted chains for canFam3-hg38.

 - canFam3.hg38.rbest.net.gz: canFam3-referenced recip.best net to hg38.
 - canFam3.hg38.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from canFam3 to hg38 through the recip.best net.

 - hg38.canFam3.rbest.net.gz: hg38-referenced recip.best net.
 - hg38.canFam3.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/canFam3.hg38.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
Parent Directory - axtRBestNet/ 2015-04-13 22:35 - canFam3.hg38.rbest.chain.gz 2015-04-13 21:57 82M canFam3.hg38.rbest.net.gz 2015-04-13 21:59 135M hg38.canFam3.rbest.chain.gz 2015-04-13 21:56 82M hg38.canFam3.rbest.net.gz 2015-04-13 21:55 150M md5sum.txt 2015-04-13 21:59 244