This directory contains reciprocal-best netted chains for calJac3-tarSyr2.

 - calJac3.tarSyr2.rbest.net.gz: calJac3-referenced recip.best net to tarSyr2.
 - calJac3.tarSyr2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from calJac3 to tarSyr2 through the recip.best net.

 - tarSyr2.calJac3.rbest.net.gz: tarSyr2-referenced recip.best net.
 - tarSyr2.calJac3.rbest.chain.gz: recip.best "liftOver" chains.

 - directory axtRBestNet/ - reciprocal best alignments in axt file format
   http://genome.ucsc.edu/goldenPath/help/axt.html

      Name                           Last modified      Size  Description
      Parent Directory                                    -   
      tarSyr2.calJac3.rbest.net.gz   2014-12-13 16:45  135M  
      tarSyr2.calJac3.rbest.chain.gz 2014-12-13 16:46   79M  
      md5sum.txt                     2014-12-13 16:48  256   
      calJac3.tarSyr2.rbest.net.gz   2014-12-13 16:48  146M  
      calJac3.tarSyr2.rbest.chain.gz 2014-12-13 16:47   79M  
      axtRBestNet/                   2014-12-13 17:25    -