This directory contains a dump of the UCSC genome annotation database
for the Feb. 2003 release of the A. gambiae genome (anoGam1) from
the International Anopheles Genome Project (version MOZ2).
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=anoGam1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/anoGam1/database/. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
The A. gambiae sequence is made freely available by The International
Anopheles Genome Project. All the annotations in this directory are
freely available for public use.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-11-17 03:31 33
chrM_gap.txt.gz 2004-08-09 19:11 33
chrM_intronEst.txt.gz 2008-03-18 03:23 106
chromInfo.txt.gz 2004-08-09 19:11 155
chr2L_gap.txt.gz 2004-08-09 19:10 171
chr3R_gap.txt.gz 2004-08-09 19:11 171
chrX_gap.txt.gz 2004-08-09 19:11 194
grp.txt.gz 2014-03-02 03:37 223
chr3R_gold.txt.gz 2004-08-09 19:11 235
chr2L_gold.txt.gz 2004-08-09 19:10 245
chrX_gold.txt.gz 2004-08-09 19:11 273
anoEstExpressed.sql 2013-10-01 12:48 307
history.txt.gz 2004-08-09 19:13 315
ensPep.sql 2013-10-01 12:48 322
chr2R_gap.txt.gz 2004-08-09 19:10 325
gbDelete_tmp.sql 2013-10-01 12:48 326
chr3L_gap.txt.gz 2004-08-09 19:10 327
genscanPep.sql 2013-10-01 12:48 330
chromInfo.sql 2013-10-01 12:48 396
ensGtp.sql 2013-10-01 12:48 438
chr3L_gold.txt.gz 2004-08-09 19:10 486
chr2R_gold.txt.gz 2004-08-09 19:10 489
history.sql 2013-10-01 12:48 537
gcPercent.sql 2013-10-01 12:48 546
chrM_gap.sql 2013-10-01 12:48 615
chrM_mrna.txt.gz 2016-06-12 06:05 665
chrU_gap.sql 2013-10-01 12:48 704
chrX_gap.sql 2013-10-01 12:48 704
chr2L_gap.sql 2013-10-01 12:48 706
chr2R_gap.sql 2013-10-01 12:48 706
chr3L_gap.sql 2013-10-01 12:48 706
chr3R_gap.sql 2013-10-01 12:48 706
genscan.sql 2013-10-01 12:48 748
chrU_gold.sql 2013-10-01 12:48 781
chrX_gold.sql 2013-10-01 12:48 781
chr2L_gold.sql 2013-10-01 12:48 783
chr2R_gold.sql 2013-10-01 12:48 783
chr3L_gold.sql 2013-10-01 12:48 783
chr3R_gold.sql 2013-10-01 12:48 783
hgFindSpec.txt.gz 2023-03-28 13:46 905
anoEstNcl.sql 2013-10-01 12:48 946
anoEstTcl.sql 2013-10-01 12:48 946
chrM_rmsk.txt.gz 2004-08-09 19:11 1.0K
geneid.sql 2013-10-01 12:48 1.0K
ensGene.sql 2013-10-01 12:48 1.0K
chrM_rmsk.sql 2013-10-01 12:48 1.0K
chrU_rmsk.sql 2013-10-01 12:48 1.0K
chrX_rmsk.sql 2013-10-01 12:48 1.0K
chr2L_rmsk.sql 2013-10-01 12:48 1.0K
chr2R_rmsk.sql 2013-10-01 12:48 1.0K
chr3L_rmsk.sql 2013-10-01 12:48 1.0K
chr3R_rmsk.sql 2013-10-01 12:48 1.0K
simpleRepeat.sql 2013-10-01 12:48 1.1K
blastDm2FB.sql 2013-10-01 12:48 1.3K
grp.sql 2014-03-02 03:37 1.4K
bigFiles.sql 2024-11-17 03:31 1.4K
tableDescriptions.sql 2024-11-16 02:03 1.4K
microsat.sql 2015-08-23 09:42 1.5K
chainDm6Link.sql 2014-12-14 08:42 1.5K
tableList.sql 2024-11-17 03:31 1.6K
gbLoaded.sql 2020-08-20 20:23 1.7K
chainDm6.sql 2014-12-14 08:42 1.7K
xenoRefFlat.sql 2020-08-20 20:23 1.7K
hgFindSpec.sql 2023-03-28 13:46 1.8K
estOrientInfo.sql 2016-06-12 06:05 1.9K
mrnaOrientInfo.sql 2020-03-01 04:47 1.9K
augustusGene.sql 2015-07-26 10:05 1.9K
xenoRefGene.sql 2020-08-20 20:23 2.0K
trackDb.sql 2023-03-28 13:46 2.1K
netDm6.sql 2014-12-14 08:42 2.1K
xenoRefSeqAli.sql 2020-08-20 20:23 2.1K
chrM_intronEst.sql 2008-03-18 03:23 2.2K
chrM_est.sql 2016-06-12 06:05 2.4K
chrU_est.sql 2016-06-12 06:05 2.4K
chrX_est.sql 2016-06-12 06:05 2.4K
chr2L_est.sql 2016-06-12 06:05 2.4K
chr2R_est.sql 2016-06-12 06:05 2.4K
chr3L_est.sql 2016-06-12 06:05 2.4K
chr3R_est.sql 2016-06-12 06:05 2.4K
chrM_mrna.sql 2016-06-12 06:05 2.4K
chrU_mrna.sql 2016-06-12 06:06 2.4K
chrX_mrna.sql 2017-04-23 10:32 2.4K
chr2L_mrna.sql 2019-07-14 05:14 2.4K
chr2R_mrna.sql 2017-11-26 05:29 2.4K
chr3L_mrna.sql 2020-03-01 04:47 2.4K
chr3R_mrna.sql 2020-03-01 04:46 2.4K
chrU_intronEst.sql 2016-06-12 06:05 2.4K
chrX_intronEst.sql 2016-06-12 06:06 2.4K
chr2L_intronEst.sql 2016-06-12 06:06 2.4K
chr2R_intronEst.sql 2016-06-12 06:05 2.4K
chr3L_intronEst.sql 2016-06-12 06:05 2.4K
chr3R_intronEst.sql 2016-06-12 06:06 2.4K
xenoMrna.sql 2020-08-20 19:42 2.4K
all_est.sql 2016-06-12 06:05 2.4K
all_mrna.sql 2020-03-01 04:47 2.4K
tableList.txt.gz 2024-11-17 03:31 4.5K
tableDescriptions.txt.gz 2024-11-16 02:03 5.1K
anoEstExpressed.txt.gz 2005-06-10 04:23 20K
trackDb.txt.gz 2023-03-28 13:46 27K
microsat.txt.gz 2015-08-23 09:42 46K
gcPercent.txt.gz 2004-10-24 04:18 85K
chrU_gap.txt.gz 2004-08-09 19:11 99K
chrU_intronEst.txt.gz 2016-06-12 06:05 129K
chrU_gold.txt.gz 2004-08-09 19:11 144K
chrX_mrna.txt.gz 2017-04-23 10:32 145K
ensGtp.txt.gz 2004-08-09 19:12 156K
gbDelete_tmp.txt.gz 2005-09-28 04:49 180K
chrM_est.txt.gz 2016-06-12 06:05 207K
gbLoaded.txt.gz 2020-08-20 20:23 210K
chrU_mrna.txt.gz 2016-06-12 06:06 241K
chrX_intronEst.txt.gz 2016-06-12 06:06 248K
chrU_est.txt.gz 2016-06-12 06:05 339K
chr3L_mrna.txt.gz 2020-03-01 04:47 394K
chrX_rmsk.txt.gz 2004-08-09 19:11 423K
chr3L_rmsk.txt.gz 2004-08-09 19:11 444K
chr3L_intronEst.txt.gz 2016-06-12 06:05 462K
anoEstTcl.txt.gz 2005-06-10 04:24 539K
chrX_est.txt.gz 2016-06-12 06:05 540K
chr3R_rmsk.txt.gz 2004-08-09 19:11 556K
chr2L_rmsk.txt.gz 2004-08-09 19:10 564K
chr2L_mrna.txt.gz 2019-07-14 05:14 565K
chr3R_intronEst.txt.gz 2016-06-12 06:06 631K
chr2R_rmsk.txt.gz 2004-08-09 19:10 651K
chr3R_mrna.txt.gz 2020-03-01 04:46 656K
chr2L_intronEst.txt.gz 2016-06-12 06:06 658K
augustusGene.txt.gz 2015-07-26 10:05 713K
mrnaOrientInfo.txt.gz 2020-03-01 04:47 721K
ensGene.txt.gz 2004-08-09 19:11 790K
chrU_rmsk.txt.gz 2004-08-09 19:11 801K
chr3L_est.txt.gz 2016-06-12 06:05 863K
geneid.txt.gz 2005-09-23 04:48 897K
chr2R_intronEst.txt.gz 2016-06-12 06:05 958K
chr2R_mrna.txt.gz 2017-11-26 05:29 1.0M
anoEstNcl.txt.gz 2005-06-10 04:23 1.0M
chr3R_est.txt.gz 2016-06-12 06:05 1.2M
chr2L_est.txt.gz 2016-06-12 06:05 1.3M
genscan.txt.gz 2005-01-09 04:31 1.3M
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
simpleRepeat.txt.gz 2004-08-09 19:15 1.6M
estOrientInfo.txt.gz 2016-06-12 06:05 1.7M
chr2R_est.txt.gz 2016-06-12 06:05 1.8M
netDm6.txt.gz 2014-12-14 08:42 1.8M
chainDm6.txt.gz 2014-12-14 08:42 2.2M
all_mrna.txt.gz 2020-03-01 04:47 3.0M
ensPep.txt.gz 2004-08-09 19:12 3.3M
xenoRefFlat.txt.gz 2020-08-20 20:23 5.8M
all_est.txt.gz 2016-06-12 06:05 6.1M
xenoRefGene.txt.gz 2020-08-20 20:23 6.5M
xenoRefSeqAli.txt.gz 2020-08-20 20:23 6.6M
genscanPep.txt.gz 2004-08-09 19:13 7.6M
chainDm6Link.txt.gz 2014-12-14 08:42 16M
xenoMrna.txt.gz 2020-08-20 19:42 118M