This directory contains a dump of the UCSC genome annotation database
for the Feb. 2003 release of the A. gambiae genome (anoGam1) from
the International Anopheles Genome Project (version MOZ2).
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=anoGam1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/anoGam1/database/. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
The A. gambiae sequence is made freely available by The International
Anopheles Genome Project. All the annotations in this directory are
freely available for public use.
Name Last modified Size Description
Parent Directory -
xenoRefSeqAli.txt.gz 2020-08-20 20:23 6.6M
xenoRefSeqAli.sql 2020-08-20 20:23 2.1K
xenoRefGene.txt.gz 2020-08-20 20:23 6.5M
xenoRefGene.sql 2020-08-20 20:23 2.0K
xenoRefFlat.txt.gz 2020-08-20 20:23 5.8M
xenoRefFlat.sql 2020-08-20 20:23 1.7K
xenoMrna.txt.gz 2020-08-20 19:42 118M
xenoMrna.sql 2020-08-20 19:42 2.4K
trackDb.txt.gz 2023-03-28 13:46 27K
trackDb.sql 2023-03-28 13:46 2.1K
tableList.txt.gz 2024-11-17 03:31 4.5K
tableList.sql 2024-11-17 03:31 1.6K
tableDescriptions.txt.gz 2024-11-16 02:03 5.1K
tableDescriptions.sql 2024-11-16 02:03 1.4K
simpleRepeat.txt.gz 2004-08-09 19:15 1.6M
simpleRepeat.sql 2013-10-01 12:48 1.1K
netDm6.txt.gz 2014-12-14 08:42 1.8M
netDm6.sql 2014-12-14 08:42 2.1K
mrnaOrientInfo.txt.gz 2020-03-01 04:47 721K
mrnaOrientInfo.sql 2020-03-01 04:47 1.9K
microsat.txt.gz 2015-08-23 09:42 46K
microsat.sql 2015-08-23 09:42 1.5K
history.txt.gz 2004-08-09 19:13 315
history.sql 2013-10-01 12:48 537
hgFindSpec.txt.gz 2023-03-28 13:46 905
hgFindSpec.sql 2023-03-28 13:46 1.8K
grp.txt.gz 2014-03-02 03:37 223
grp.sql 2014-03-02 03:37 1.4K
genscanPep.txt.gz 2004-08-09 19:13 7.6M
genscanPep.sql 2013-10-01 12:48 330
genscan.txt.gz 2005-01-09 04:31 1.3M
genscan.sql 2013-10-01 12:48 748
geneid.txt.gz 2005-09-23 04:48 897K
geneid.sql 2013-10-01 12:48 1.0K
gcPercent.txt.gz 2004-10-24 04:18 85K
gcPercent.sql 2013-10-01 12:48 546
gbLoaded.txt.gz 2020-08-20 20:23 210K
gbLoaded.sql 2020-08-20 20:23 1.7K
gbDelete_tmp.txt.gz 2005-09-28 04:49 180K
gbDelete_tmp.sql 2013-10-01 12:48 326
estOrientInfo.txt.gz 2016-06-12 06:05 1.7M
estOrientInfo.sql 2016-06-12 06:05 1.9K
ensPep.txt.gz 2004-08-09 19:12 3.3M
ensPep.sql 2013-10-01 12:48 322
ensGtp.txt.gz 2004-08-09 19:12 156K
ensGtp.sql 2013-10-01 12:48 438
ensGene.txt.gz 2004-08-09 19:11 790K
ensGene.sql 2013-10-01 12:48 1.0K
chromInfo.txt.gz 2004-08-09 19:11 155
chromInfo.sql 2013-10-01 12:48 396
chrX_rmsk.txt.gz 2004-08-09 19:11 423K
chrX_rmsk.sql 2013-10-01 12:48 1.0K
chrX_mrna.txt.gz 2017-04-23 10:32 145K
chrX_mrna.sql 2017-04-23 10:32 2.4K
chrX_intronEst.txt.gz 2016-06-12 06:06 248K
chrX_intronEst.sql 2016-06-12 06:06 2.4K
chrX_gold.txt.gz 2004-08-09 19:11 273
chrX_gold.sql 2013-10-01 12:48 781
chrX_gap.txt.gz 2004-08-09 19:11 194
chrX_gap.sql 2013-10-01 12:48 704
chrX_est.txt.gz 2016-06-12 06:05 540K
chrX_est.sql 2016-06-12 06:05 2.4K
chrU_rmsk.txt.gz 2004-08-09 19:11 801K
chrU_rmsk.sql 2013-10-01 12:48 1.0K
chrU_mrna.txt.gz 2016-06-12 06:06 241K
chrU_mrna.sql 2016-06-12 06:06 2.4K
chrU_intronEst.txt.gz 2016-06-12 06:05 129K
chrU_intronEst.sql 2016-06-12 06:05 2.4K
chrU_gold.txt.gz 2004-08-09 19:11 144K
chrU_gold.sql 2013-10-01 12:48 781
chrU_gap.txt.gz 2004-08-09 19:11 99K
chrU_gap.sql 2013-10-01 12:48 704
chrU_est.txt.gz 2016-06-12 06:05 339K
chrU_est.sql 2016-06-12 06:05 2.4K
chrM_rmsk.txt.gz 2004-08-09 19:11 1.0K
chrM_rmsk.sql 2013-10-01 12:48 1.0K
chrM_mrna.txt.gz 2016-06-12 06:05 665
chrM_mrna.sql 2016-06-12 06:05 2.4K
chrM_intronEst.txt.gz 2008-03-18 03:23 106
chrM_intronEst.sql 2008-03-18 03:23 2.2K
chrM_gap.txt.gz 2004-08-09 19:11 33
chrM_gap.sql 2013-10-01 12:48 615
chrM_est.txt.gz 2016-06-12 06:05 207K
chrM_est.sql 2016-06-12 06:05 2.4K
chr3R_rmsk.txt.gz 2004-08-09 19:11 556K
chr3R_rmsk.sql 2013-10-01 12:48 1.0K
chr3R_mrna.txt.gz 2020-03-01 04:46 656K
chr3R_mrna.sql 2020-03-01 04:46 2.4K
chr3R_intronEst.txt.gz 2016-06-12 06:06 631K
chr3R_intronEst.sql 2016-06-12 06:06 2.4K
chr3R_gold.txt.gz 2004-08-09 19:11 235
chr3R_gold.sql 2013-10-01 12:48 783
chr3R_gap.txt.gz 2004-08-09 19:11 171
chr3R_gap.sql 2013-10-01 12:48 706
chr3R_est.txt.gz 2016-06-12 06:05 1.2M
chr3R_est.sql 2016-06-12 06:05 2.4K
chr3L_rmsk.txt.gz 2004-08-09 19:11 444K
chr3L_rmsk.sql 2013-10-01 12:48 1.0K
chr3L_mrna.txt.gz 2020-03-01 04:47 394K
chr3L_mrna.sql 2020-03-01 04:47 2.4K
chr3L_intronEst.txt.gz 2016-06-12 06:05 462K
chr3L_intronEst.sql 2016-06-12 06:05 2.4K
chr3L_gold.txt.gz 2004-08-09 19:10 486
chr3L_gold.sql 2013-10-01 12:48 783
chr3L_gap.txt.gz 2004-08-09 19:10 327
chr3L_gap.sql 2013-10-01 12:48 706
chr3L_est.txt.gz 2016-06-12 06:05 863K
chr3L_est.sql 2016-06-12 06:05 2.4K
chr2R_rmsk.txt.gz 2004-08-09 19:10 651K
chr2R_rmsk.sql 2013-10-01 12:48 1.0K
chr2R_mrna.txt.gz 2017-11-26 05:29 1.0M
chr2R_mrna.sql 2017-11-26 05:29 2.4K
chr2R_intronEst.txt.gz 2016-06-12 06:05 958K
chr2R_intronEst.sql 2016-06-12 06:05 2.4K
chr2R_gold.txt.gz 2004-08-09 19:10 489
chr2R_gold.sql 2013-10-01 12:48 783
chr2R_gap.txt.gz 2004-08-09 19:10 325
chr2R_gap.sql 2013-10-01 12:48 706
chr2R_est.txt.gz 2016-06-12 06:05 1.8M
chr2R_est.sql 2016-06-12 06:05 2.4K
chr2L_rmsk.txt.gz 2004-08-09 19:10 564K
chr2L_rmsk.sql 2013-10-01 12:48 1.0K
chr2L_mrna.txt.gz 2019-07-14 05:14 565K
chr2L_mrna.sql 2019-07-14 05:14 2.4K
chr2L_intronEst.txt.gz 2016-06-12 06:06 658K
chr2L_intronEst.sql 2016-06-12 06:06 2.4K
chr2L_gold.txt.gz 2004-08-09 19:10 245
chr2L_gold.sql 2013-10-01 12:48 783
chr2L_gap.txt.gz 2004-08-09 19:10 171
chr2L_gap.sql 2013-10-01 12:48 706
chr2L_est.txt.gz 2016-06-12 06:05 1.3M
chr2L_est.sql 2016-06-12 06:05 2.4K
chainDm6Link.txt.gz 2014-12-14 08:42 16M
chainDm6Link.sql 2014-12-14 08:42 1.5K
chainDm6.txt.gz 2014-12-14 08:42 2.2M
chainDm6.sql 2014-12-14 08:42 1.7K
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
blastDm2FB.sql 2013-10-01 12:48 1.3K
bigFiles.txt.gz 2024-11-17 03:31 33
bigFiles.sql 2024-11-17 03:31 1.4K
augustusGene.txt.gz 2015-07-26 10:05 713K
augustusGene.sql 2015-07-26 10:05 1.9K
anoEstTcl.txt.gz 2005-06-10 04:24 539K
anoEstTcl.sql 2013-10-01 12:48 946
anoEstNcl.txt.gz 2005-06-10 04:23 1.0M
anoEstNcl.sql 2013-10-01 12:48 946
anoEstExpressed.txt.gz 2005-06-10 04:23 20K
anoEstExpressed.sql 2013-10-01 12:48 307
all_mrna.txt.gz 2020-03-01 04:47 3.0M
all_mrna.sql 2020-03-01 04:47 2.4K
all_est.txt.gz 2016-06-12 06:05 6.1M
all_est.sql 2016-06-12 06:05 2.4K