This directory contains a dump of the UCSC genome annotation database for the Feb. 2003 release of the A. gambiae genome (anoGam1) from the International Anopheles Genome Project (version MOZ2). Files included in this directory (updated nightly): - *.sql files: the MySQL commands used to create the tables. To see descriptions of the tables underlying Genome Browser annotation tracks, select the table in the Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables?db=anoGam1 and click the "describe table schema" button. There is also a "view table schema" link on the configuration page for each track. - *.txt.gz files: the database tables in a tab-delimited format compressed with gzip. ----------------------------------------------------------------- If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/anoGam1/database/. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) The A. gambiae sequence is made freely available by The International Anopheles Genome Project. All the annotations in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory - all_est.sql 2016-06-12 06:05 2.4K all_est.txt.gz 2016-06-12 06:05 6.1M all_mrna.sql 2020-03-01 04:47 2.4K all_mrna.txt.gz 2020-03-01 04:47 3.0M anoEstExpressed.sql 2013-10-01 12:48 307 anoEstExpressed.txt.gz 2005-06-10 04:23 20K anoEstNcl.sql 2013-10-01 12:48 946 anoEstNcl.txt.gz 2005-06-10 04:23 1.0M anoEstTcl.sql 2013-10-01 12:48 946 anoEstTcl.txt.gz 2005-06-10 04:24 539K augustusGene.sql 2015-07-26 10:05 1.9K augustusGene.txt.gz 2015-07-26 10:05 713K bigFiles.sql 2024-09-01 03:24 1.4K bigFiles.txt.gz 2024-09-01 03:24 33 blastDm2FB.sql 2013-10-01 12:48 1.3K blastDm2FB.txt.gz 2005-07-28 05:23 1.3M chainDm6.sql 2014-12-14 08:42 1.7K chainDm6.txt.gz 2014-12-14 08:42 2.2M chainDm6Link.sql 2014-12-14 08:42 1.5K chainDm6Link.txt.gz 2014-12-14 08:42 16M chr2L_est.sql 2016-06-12 06:05 2.4K chr2L_est.txt.gz 2016-06-12 06:05 1.3M chr2L_gap.sql 2013-10-01 12:48 706 chr2L_gap.txt.gz 2004-08-09 19:10 171 chr2L_gold.sql 2013-10-01 12:48 783 chr2L_gold.txt.gz 2004-08-09 19:10 245 chr2L_intronEst.sql 2016-06-12 06:06 2.4K chr2L_intronEst.txt.gz 2016-06-12 06:06 658K chr2L_mrna.sql 2019-07-14 05:14 2.4K chr2L_mrna.txt.gz 2019-07-14 05:14 565K chr2L_rmsk.sql 2013-10-01 12:48 1.0K chr2L_rmsk.txt.gz 2004-08-09 19:10 564K chr2R_est.sql 2016-06-12 06:05 2.4K chr2R_est.txt.gz 2016-06-12 06:05 1.8M chr2R_gap.sql 2013-10-01 12:48 706 chr2R_gap.txt.gz 2004-08-09 19:10 325 chr2R_gold.sql 2013-10-01 12:48 783 chr2R_gold.txt.gz 2004-08-09 19:10 489 chr2R_intronEst.sql 2016-06-12 06:05 2.4K chr2R_intronEst.txt.gz 2016-06-12 06:05 958K chr2R_mrna.sql 2017-11-26 05:29 2.4K chr2R_mrna.txt.gz 2017-11-26 05:29 1.0M chr2R_rmsk.sql 2013-10-01 12:48 1.0K chr2R_rmsk.txt.gz 2004-08-09 19:10 651K chr3L_est.sql 2016-06-12 06:05 2.4K chr3L_est.txt.gz 2016-06-12 06:05 863K chr3L_gap.sql 2013-10-01 12:48 706 chr3L_gap.txt.gz 2004-08-09 19:10 327 chr3L_gold.sql 2013-10-01 12:48 783 chr3L_gold.txt.gz 2004-08-09 19:10 486 chr3L_intronEst.sql 2016-06-12 06:05 2.4K chr3L_intronEst.txt.gz 2016-06-12 06:05 462K chr3L_mrna.sql 2020-03-01 04:47 2.4K chr3L_mrna.txt.gz 2020-03-01 04:47 394K chr3L_rmsk.sql 2013-10-01 12:48 1.0K chr3L_rmsk.txt.gz 2004-08-09 19:11 444K chr3R_est.sql 2016-06-12 06:05 2.4K chr3R_est.txt.gz 2016-06-12 06:05 1.2M chr3R_gap.sql 2013-10-01 12:48 706 chr3R_gap.txt.gz 2004-08-09 19:11 171 chr3R_gold.sql 2013-10-01 12:48 783 chr3R_gold.txt.gz 2004-08-09 19:11 235 chr3R_intronEst.sql 2016-06-12 06:06 2.4K chr3R_intronEst.txt.gz 2016-06-12 06:06 631K chr3R_mrna.sql 2020-03-01 04:46 2.4K chr3R_mrna.txt.gz 2020-03-01 04:46 656K chr3R_rmsk.sql 2013-10-01 12:48 1.0K chr3R_rmsk.txt.gz 2004-08-09 19:11 556K chrM_est.sql 2016-06-12 06:05 2.4K chrM_est.txt.gz 2016-06-12 06:05 207K chrM_gap.sql 2013-10-01 12:48 615 chrM_gap.txt.gz 2004-08-09 19:11 33 chrM_intronEst.sql 2008-03-18 03:23 2.2K chrM_intronEst.txt.gz 2008-03-18 03:23 106 chrM_mrna.sql 2016-06-12 06:05 2.4K chrM_mrna.txt.gz 2016-06-12 06:05 665 chrM_rmsk.sql 2013-10-01 12:48 1.0K chrM_rmsk.txt.gz 2004-08-09 19:11 1.0K chrU_est.sql 2016-06-12 06:05 2.4K chrU_est.txt.gz 2016-06-12 06:05 339K chrU_gap.sql 2013-10-01 12:48 704 chrU_gap.txt.gz 2004-08-09 19:11 99K chrU_gold.sql 2013-10-01 12:48 781 chrU_gold.txt.gz 2004-08-09 19:11 144K chrU_intronEst.sql 2016-06-12 06:05 2.4K chrU_intronEst.txt.gz 2016-06-12 06:05 129K chrU_mrna.sql 2016-06-12 06:06 2.4K chrU_mrna.txt.gz 2016-06-12 06:06 241K chrU_rmsk.sql 2013-10-01 12:48 1.0K chrU_rmsk.txt.gz 2004-08-09 19:11 801K chrX_est.sql 2016-06-12 06:05 2.4K chrX_est.txt.gz 2016-06-12 06:05 540K chrX_gap.sql 2013-10-01 12:48 704 chrX_gap.txt.gz 2004-08-09 19:11 194 chrX_gold.sql 2013-10-01 12:48 781 chrX_gold.txt.gz 2004-08-09 19:11 273 chrX_intronEst.sql 2016-06-12 06:06 2.4K chrX_intronEst.txt.gz 2016-06-12 06:06 248K chrX_mrna.sql 2017-04-23 10:32 2.4K chrX_mrna.txt.gz 2017-04-23 10:32 145K chrX_rmsk.sql 2013-10-01 12:48 1.0K chrX_rmsk.txt.gz 2004-08-09 19:11 423K chromInfo.sql 2013-10-01 12:48 396 chromInfo.txt.gz 2004-08-09 19:11 155 ensGene.sql 2013-10-01 12:48 1.0K ensGene.txt.gz 2004-08-09 19:11 790K ensGtp.sql 2013-10-01 12:48 438 ensGtp.txt.gz 2004-08-09 19:12 156K ensPep.sql 2013-10-01 12:48 322 ensPep.txt.gz 2004-08-09 19:12 3.3M estOrientInfo.sql 2016-06-12 06:05 1.9K estOrientInfo.txt.gz 2016-06-12 06:05 1.7M gbDelete_tmp.sql 2013-10-01 12:48 326 gbDelete_tmp.txt.gz 2005-09-28 04:49 180K gbLoaded.sql 2020-08-20 20:23 1.7K gbLoaded.txt.gz 2020-08-20 20:23 210K gcPercent.sql 2013-10-01 12:48 546 gcPercent.txt.gz 2004-10-24 04:18 85K geneid.sql 2013-10-01 12:48 1.0K geneid.txt.gz 2005-09-23 04:48 897K genscan.sql 2013-10-01 12:48 748 genscan.txt.gz 2005-01-09 04:31 1.3M genscanPep.sql 2013-10-01 12:48 330 genscanPep.txt.gz 2004-08-09 19:13 7.6M grp.sql 2014-03-02 03:37 1.4K grp.txt.gz 2014-03-02 03:37 223 hgFindSpec.sql 2023-03-28 13:46 1.8K hgFindSpec.txt.gz 2023-03-28 13:46 905 history.sql 2013-10-01 12:48 537 history.txt.gz 2004-08-09 19:13 315 microsat.sql 2015-08-23 09:42 1.5K microsat.txt.gz 2015-08-23 09:42 46K mrnaOrientInfo.sql 2020-03-01 04:47 1.9K mrnaOrientInfo.txt.gz 2020-03-01 04:47 721K netDm6.sql 2014-12-14 08:42 2.1K netDm6.txt.gz 2014-12-14 08:42 1.8M simpleRepeat.sql 2013-10-01 12:48 1.1K simpleRepeat.txt.gz 2004-08-09 19:15 1.6M tableDescriptions.sql 2024-08-31 02:03 1.4K tableDescriptions.txt.gz 2024-08-31 02:03 5.1K tableList.sql 2024-09-01 03:24 1.6K tableList.txt.gz 2024-09-01 03:24 4.5K trackDb.sql 2023-03-28 13:46 2.1K trackDb.txt.gz 2023-03-28 13:46 27K xenoMrna.sql 2020-08-20 19:42 2.4K xenoMrna.txt.gz 2020-08-20 19:42 118M xenoRefFlat.sql 2020-08-20 20:23 1.7K xenoRefFlat.txt.gz 2020-08-20 20:23 5.8M xenoRefGene.sql 2020-08-20 20:23 2.0K xenoRefGene.txt.gz 2020-08-20 20:23 6.5M xenoRefSeqAli.sql 2020-08-20 20:23 2.1K xenoRefSeqAli.txt.gz 2020-08-20 20:23 6.6M