This directory contains a dump of the UCSC genome annotation database for
the Feb. 2007 assembly of the lizard genome (anoCar1, Broad Institute AnoCar (1.0)).
The annotations were generated by UCSC and collaborators worldwide.
This assembly was produced by the Broad Institute at MIT and Harvard.
For more information on the lizard genome, see the project website:
http://www.broad.mit.edu/models/anole/
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=anoCar1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
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If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the files
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to
the directory goldenPath/anoCar1/database/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
Name Last modified Size Description
Parent Directory -
xenoRefSeqAli.txt.gz 2020-08-20 19:42 27M
xenoRefSeqAli.sql 2020-08-20 19:42 2.1K
xenoRefGene.txt.gz 2020-08-20 19:42 30M
xenoRefGene.sql 2020-08-20 19:42 2.0K
xenoRefFlat.txt.gz 2020-08-20 19:42 27M
xenoRefFlat.sql 2020-08-20 19:42 1.7K
xenoMrna.txt.gz 2016-02-21 09:22 226M
xenoMrna.sql 2016-02-21 09:21 2.1K
windowmaskerSdust.txt.gz 2007-05-21 14:50 54M
windowmaskerSdust.sql 2007-05-21 14:50 1.3K
trackDb.txt.gz 2023-03-28 13:46 21K
trackDb.sql 2023-03-28 13:46 2.1K
tableList.txt.gz 2024-11-17 03:22 3.0K
tableList.sql 2024-11-17 03:22 1.6K
tableDescriptions.txt.gz 2024-11-16 02:03 5.1K
tableDescriptions.sql 2024-11-16 02:03 1.4K
simpleRepeat.txt.gz 2007-05-21 14:50 14M
simpleRepeat.sql 2007-05-21 14:49 1.9K
rmsk.txt.gz 2007-05-21 14:49 20M
rmsk.sql 2007-05-21 14:49 1.9K
quality.txt.gz 2007-05-21 14:49 33M
quality.sql 2007-05-21 14:48 1.7K
netXenTro2.txt.gz 2007-05-21 14:48 7.7M
netXenTro2.sql 2007-05-21 14:48 2.2K
netOrnAna1.txt.gz 2007-06-01 12:41 9.7M
netOrnAna1.sql 2007-06-01 12:40 2.2K
netMm9.txt.gz 2007-10-18 17:36 8.6M
netMm9.sql 2007-10-18 17:36 2.2K
netHg19.txt.gz 2009-10-11 04:45 9.3M
netHg19.sql 2009-10-11 04:45 2.3K
netGasAcu1.txt.gz 2007-05-21 14:47 6.0M
netGasAcu1.sql 2007-05-21 14:47 2.2K
netGalGal3.txt.gz 2007-05-21 14:47 9.9M
netGalGal3.sql 2007-05-21 14:47 2.2K
mrnaOrientInfo.txt.gz 2019-05-26 04:24 3.1K
mrnaOrientInfo.sql 2019-05-26 04:24 1.8K
microsat.txt.gz 2015-08-23 09:29 958K
microsat.sql 2015-08-23 09:29 1.5K
history.txt.gz 2007-05-21 14:47 597
history.sql 2007-05-21 14:47 1.4K
hgFindSpec.txt.gz 2023-03-28 13:46 794
hgFindSpec.sql 2023-03-28 13:46 1.8K
grp.txt.gz 2014-03-02 03:37 208
grp.sql 2014-03-02 03:37 1.4K
gold.txt.gz 2007-05-21 14:47 796K
gold.sql 2007-05-21 14:47 1.6K
genscanSubopt.txt.gz 2007-05-21 14:47 3.4M
genscanSubopt.sql 2007-05-21 14:47 1.5K
genscanPep.txt.gz 2007-05-21 14:47 5.9M
genscanPep.sql 2007-05-21 14:47 1.2K
genscan.txt.gz 2007-05-21 14:47 1.6M
genscan.sql 2007-05-21 14:47 1.6K
gc5Base.txt.gz 2007-05-21 14:46 7.0M
gc5Base.sql 2007-05-21 14:46 1.7K
gbLoaded.txt.gz 2020-08-20 19:42 15K
gbLoaded.sql 2020-08-20 19:42 1.6K
gap.txt.gz 2007-05-21 14:45 549K
gap.sql 2007-05-21 14:45 1.5K
ensPep.txt.gz 2010-08-29 10:49 4.7M
ensPep.sql 2010-08-29 10:49 1.3K
ensGtp.txt.gz 2010-08-29 10:49 206K
ensGtp.sql 2010-08-29 10:49 1.4K
ensGene.txt.gz 2010-08-29 10:49 1.7M
ensGene.sql 2010-08-29 10:49 1.9K
chromInfo.txt.gz 2007-05-21 14:45 39K
chromInfo.sql 2007-05-21 14:45 1.2K
chainXenTro2Link.txt.gz 2007-05-21 14:37 702M
chainXenTro2Link.sql 2007-05-21 14:28 1.4K
chainXenTro2.txt.gz 2007-05-21 14:28 57M
chainXenTro2.sql 2007-05-21 14:27 1.7K
chainOrnAna1Link.txt.gz 2007-06-01 12:37 183M
chainOrnAna1Link.sql 2007-06-01 12:34 1.4K
chainOrnAna1.txt.gz 2007-06-01 12:33 48M
chainOrnAna1.sql 2007-06-01 12:33 1.7K
chainMm9Link.txt.gz 2007-10-18 17:32 144M
chainMm9Link.sql 2007-10-18 17:29 1.4K
chainMm9.txt.gz 2007-10-18 17:36 15M
chainMm9.sql 2007-10-18 17:36 1.6K
chainHg19Link.txt.gz 2009-10-11 04:46 213M
chainHg19Link.sql 2009-10-11 04:45 1.5K
chainHg19.txt.gz 2009-10-11 04:45 58M
chainHg19.sql 2009-10-11 04:45 1.8K
chainGasAcu1Link.txt.gz 2007-05-21 14:18 77M
chainGasAcu1Link.sql 2007-05-21 14:17 1.4K
chainGasAcu1.txt.gz 2007-05-21 14:17 12M
chainGasAcu1.sql 2007-05-21 14:16 1.7K
chainGalGal3Link.txt.gz 2007-05-21 14:16 53M
chainGalGal3Link.sql 2007-05-21 14:15 1.4K
chainGalGal3.txt.gz 2007-05-21 14:15 8.3M
chainGalGal3.sql 2007-05-21 14:15 1.7K
blastHg18KG.txt.gz 2009-12-20 10:09 2.8M
blastHg18KG.sql 2009-12-20 10:09 2.3K
bigFiles.txt.gz 2024-11-17 03:22 33
bigFiles.sql 2024-11-17 03:22 1.4K
augustusGene.txt.gz 2015-07-26 09:51 1.9M
augustusGene.sql 2015-07-26 09:51 1.9K
all_mrna.txt.gz 2019-05-26 04:24 11K
all_mrna.sql 2019-05-26 04:24 2.1K