(Photo courtesy of Maxim Zakhartsev)
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S. cerevisiae (Photo courtesy of Maxim Zakhartsev) |
The April 2011 Saccharomyces cerevisiae genome assembly (Saccharomyces cerevisiae S288c assembly from Saccharomyces Genome Database (GCA_000146045.2)) was produced by the Saccharomyces Genome Database (SGD™) project. For more information about this assembly, see R64-1-1 in the NCBI Assembly database.
View additional model organism data at the Alliance of Genome Resources.A genome position can be specified by the name of a gene or an ORF, the accession number of an mRNA or EST, a chromosomal range, or a keyword from a SGD gene description or GenBank mRNA description. The following list provides examples of valid position queries for the yeast genome. See the User's Guide for more information.
| Request: |
Genome Browser Response: |
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| chrIII | Displays all of chromosome III | |
| chrXVI:551,819-563,822 | Displays the indicated bases from chromosome XVI | |
| D38368 | Shows region where GenBank mRNA D38368 aligns | |
| AA417514 | Displays region where EST AA417514 aligns | |
| swi1 | Displays the genomic region encoding the SWI1 component of the SWI/SNF chromatin remodeling complex | |
| YPL016W | Same as above. YPL016W is the ORF name for SWI1 | |
| meiosis | Lists genes and mRNAs that include "meiosis" in their description | |
| Menees | Lists RNAs deposited by scientist named Menees | |
| Roeder,G.S. | Lists mRNAs deposited by co-author G. S. Roeder | |
| Use this last format for author queries. Although GenBank requires the search format Roeder GS, internally it uses the format Roeder,G.S.. | ||
Chromosomes available in this assembly: chrI, chrII, chrIII, chrIV ... etc ... chrXVI, and chrM. See also: SGD™ genome snapshot/overview
This genome sequence was downloaded from the site: NCBI genbank/genomes/Eukaryotes/fungi/Saccharomyces_cerevisiae/R64-1-1/.
The SGD™ gene annotations were downloaded from the SGD Downloads Site. The S288C strain was used in this sequencing project. Reference information for each chromosome may be found in the SGD Systematic Sequencing Table. For more information about the yeast genetic and physical maps, see the paper Cherry JM et al. Genetic and physical maps of Saccharomyces cerevisiae. Nature. 1997 May 29;387(6632 Suppl):67-73.
Downloads of the yeast data and annotations may be obtained from the UCSC Genome Browser FTP server or Downloads page. The S. cerevisiae annotation tracks were generated by UCSC and collaborators worldwide. See the Credits page for a detailed list of the organizations and individuals who contributed to this release.