Photo credit: Phil Myers, Museum of Zoology, University of Michigan. All rights reserved.
Courtesy of National Science Foundation
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Myotis lucifugus Photo credit: Phil Myers, Museum of Zoology, University of Michigan. All rights reserved. Courtesy of National Science Foundation |
The Jul. 2010 Myotis lucifugus draft assembly (Broad Institute (NCBI Project 16951, GCA_000147115.1)) produced by the Little Brown Bat Genome Project at Broad Institute of MIT and Harvard. For more information about this assembly, see Myoluc2.0 in the NCBI Assembly database.
A genome position can be specified by the accession number of a sequenced genomic region, an mRNA or EST, a chromosomal coordinate range, or keywords from the GenBank description of an mRNA. The following list shows examples of valid position queries for the Little brown bat genome. See the User's Guide for more information.
| Request: | Genome Browser Response: | |
|---|---|---|
| GL429775 | Displays all of scaffold GL429775 | |
| GL429775:1-1000000 | Displays first million bases of GL429775 | |
| GL429775:1000000+2000 | Displays a region of scaffold GL429775 that spans 2000 bases, starting with position 1000000 | |
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| EU044718 | Displays region of mRNA with GenBank accession number EU044718 | |
| AK131176 | Displays region of Other mRNA with GenBank accession AK131176 | |
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AY057101; AY728075 | Displays region between genome landmarks, such as the mRNA markers AY057101 and AY728075. This syntax may also be used for other range queries, such as between uniquely determined ESTs, STSs, refSeqs, etc. | |
| homeobox caudal | Lists mRNAs for caudal homeobox genes | |
| zinc finger | Lists many zinc finger mRNAs | |
| kruppel zinc finger | Lists only kruppel-like zinc fingers | |
| zahler | Lists mRNAs deposited by scientist named Zahler | |
| Evans,J.E. | Lists mRNAs deposited by co-author J.E. Evans | |
| Use this last format for author queries. Although GenBank requires the search format Evans JE, internally it uses the format Evans,J.E.. | ||
The genome has been sequenced to 2X coverage. There are 3407 scaffolds (named GLnnnnnn) with 8247 unplaced contigs (named AAPEnnnnnnnn) in the assembly. The sequence length is 2,034,575,300 bases. There are 68,155,432 'N' bases in gaps, leaving 1,966,419,868 ACGT bases.
Bulk downloads of the sequence and annotation data are available via the Genome Browser FTP server or the Downloads page. The Little brown bat browser annotation tracks were generated by UCSC and collaborators worldwide. See the Credits page for a detailed list of the organizations and individuals who contributed to the success of this release.